pystencils merge requestshttps://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests2019-08-06T22:07:34+02:00https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/25Make generate_c also work if astnode does not have member `instruction_set`2019-08-06T22:07:34+02:00Stephan SeitzMake generate_c also work if astnode does not have member `instruction_set`generate_c currently only works for KernelFunctions, since member `instruction_set` is required.
generate_c can generate code for any astnode if this requirement is dropped.generate_c currently only works for KernelFunctions, since member `instruction_set` is required.
generate_c can generate code for any astnode if this requirement is dropped.https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/21Add RELEASE-VERSION to .gitignore2019-08-06T22:04:11+02:00Stephan SeitzAdd RELEASE-VERSION to .gitignorehttps://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/16Declare FieldShapeSymbol and FieldStrideSymbol as strictly positive2019-08-06T08:06:27+02:00Stephan SeitzDeclare FieldShapeSymbol and FieldStrideSymbol as strictly positiveWe can assume that FieldShapeSymbol and FieldStrideSymbol are always positive.
`TypedSymbol` should forward kwargs to `sympy.Symbol`.We can assume that FieldShapeSymbol and FieldStrideSymbol are always positive.
`TypedSymbol` should forward kwargs to `sympy.Symbol`.https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/18Fix #10: Avoid jinja2 dependency2019-08-06T08:05:02+02:00Stephan SeitzFix #10: Avoid jinja2 dependencyThis commit avoid dependency of core pystencils on jinja2.
However this could make the printing of some AST-nodes less elegant (see https://i10git.cs.fau.de/pycodegen/pystencils/merge_requests/17).This commit avoid dependency of core pystencils on jinja2.
However this could make the printing of some AST-nodes less elegant (see https://i10git.cs.fau.de/pycodegen/pystencils/merge_requests/17).https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/14Remove floor, ceiling for integer symbols2019-08-02T22:26:37+02:00Stephan SeitzRemove floor, ceiling for integer symbols# Original Intent
Allow optimizations by SymPy when we know that a `TypedSymbol` `is_integer` or `is_real`
(e.g. drop rounding functions).
We can deduce some of those properties with Numpy's type system (https://docs.scipy.org/doc...# Original Intent
Allow optimizations by SymPy when we know that a `TypedSymbol` `is_integer` or `is_real`
(e.g. drop rounding functions).
We can deduce some of those properties with Numpy's type system (https://docs.scipy.org/doc/numpy-1.13.0/reference/arrays.scalars.html).
We have to be careful since all the `is_*` methods have ternary logic (`True`, `False`, `None`== we don't know).
Field.Access can take advantage of those optimizations by making it a subclass of `TypedSymbol`.
# Extended Changes
By writing a test I realized that it would be handy to compare `AssignmentCollection`s and use the functions `find`, `match`, `subs`, `replace` of SymPy.https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/12fix compiler options for macOS2019-07-31T09:14:52+02:00Michael Kuronmkuron@icp.uni-stuttgart.defix compiler options for macOSMartin BauerMartin Bauerhttps://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/9Add CudaBackend, CudaSympyPrinter2019-07-18T10:04:27+02:00Stephan SeitzAdd CudaBackend, CudaSympyPrinterAdd CudaBackend, CudaSympyPrinter to extract CUDA-specific code from CBackend, CustomSympyPrinter
Cuda built-ins are added to `CudaSympyPrinter.known_functions` to use them as sympy.FunctionAdd CudaBackend, CudaSympyPrinter to extract CUDA-specific code from CBackend, CustomSympyPrinter
Cuda built-ins are added to `CudaSympyPrinter.known_functions` to use them as sympy.Functionhttps://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/4Destructuring field binding2019-07-10T17:24:07+02:00Stephan SeitzDestructuring field bindingAdd DestructuringBindingsForFieldClass to use pystencils kernels in a more C++-ish way
DestructuringBindingsForFieldClass defines all field-related variables
in its subordinated block.
However, it leaves a TypedSymbol of type `Field...Add DestructuringBindingsForFieldClass to use pystencils kernels in a more C++-ish way
DestructuringBindingsForFieldClass defines all field-related variables
in its subordinated block.
However, it leaves a TypedSymbol of type `Field` for each field
undefined.
By that trick we can generate kernels that accept structs as
kernelparameters.
Either to include a pystencils specific Field struct of the following
definition:
```cpp
template<DTYPE_T, DIMENSION>
struct Field
{
DTYPE_T* data;
std::array<int64_t, DIMENSION> shape;
std::array<int64_t, DIMENSION> stride;
}
```
or to be able to destructure user defined types like `pybind11::array`,
`at::Tensor`, `tensorflow::Tensor`.
The test generates a kernel like that:
```cpp
FUNC_PREFIX void kernel(Field<double, 2>& x, Field<double, 2>& y, Field<double, 2>& z)
{
_stride_z_1 = z.stride[1];
_size_x_0 = x.shape[0];
_stride_x_1 = x.stride[1];
_stride_z_0 = z.stride[0];
_size_x_1 = x.shape[1];
_stride_y_1 = y.stride[1];
_data_x = x.data;
_stride_x_0 = x.stride[0];
_data_z = z.data;
_stride_y_0 = y.stride[0];
_data_y = y.data;
{
for (int ctr_0 = 0; ctr_0 < _size_x_0; ctr_0 += 1)
{
double * RESTRICT _data_z_00 = _data_z + _stride_z_0*ctr_0;
double * RESTRICT const _data_y_00 = _data_y + _stride_y_0*ctr_0;
double * RESTRICT const _data_x_00 = _data_x + _stride_x_0*ctr_0;
for (int ctr_1 = 0; ctr_1 < _size_x_1; ctr_1 += 1)
{
_data_z_00[_stride_z_1*ctr_1] = log(_data_x_00[_stride_x_1*ctr_1]*_data_y_00[_stride_y_1*ctr_1])*_data_y_00[_stride_y_1*ctr_1];
}
}
}
}
```https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/5Add global_declarations to cbackend2019-07-10T16:20:44+02:00Stephan SeitzAdd global_declarations to cbackendThis enables `astnodes.Nodes` to have a member `required_global_declarations`
by which they can specify a global declaration required for their usage.
In the test, I added a AST-Node Bogus which requires a global declaration. The global...This enables `astnodes.Nodes` to have a member `required_global_declarations`
by which they can specify a global declaration required for their usage.
In the test, I added a AST-Node Bogus which requires a global declaration. The global declaration can define symbols required in the kernel that will then not appear in the kernel parameters
```cpp
// Declaration would go here
FUNC_PREFIX void kernel(double * RESTRICT const _data_x, double * RESTRICT const _data_y, double * RESTRICT _data_z, int64_t const _size_1, int64_t const _stride_z_0, int64_t const _stride_z_1)
{
for (int ctr_0 = 0; ctr_0 < _size_x_0; ctr_0 += 1)
{
double * RESTRICT _data_z_00 = _data_z + _stride_z_0*ctr_0;
double * RESTRICT const _data_y_00 = _data_y + _stride_y_0*ctr_0;
double * RESTRICT const _data_x_00 = _data_x + _stride_x_0*ctr_0;
for (int ctr_1 = 0; ctr_1 < _size_x_1; ctr_1 += 1)
{
_data_z_00[_stride_z_1*ctr_1] = log(_data_x_00[_stride_x_1*ctr_1]*_data_y_00[_stride_y_1*ctr_1])*_data_y_00[_stride_y_1*ctr_1];
}
}
// Bogus would go here
}
```
I used this code for my CudaBackend (instead of CBackend) to enable the forward declaration of textures and constant memory.https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/3Make subexpressions optional for constructing an AssignmentCollection2019-07-10T16:18:05+02:00Stephan SeitzMake subexpressions optional for constructing an AssignmentCollectionWhen introducing new people to pystencils it's often simpler not to
differentiate between `main_assignments` and `subexpressions` in the
beginning.
Also for simple kernels subexpressions are often not needed, since
intermediate symbols c...When introducing new people to pystencils it's often simpler not to
differentiate between `main_assignments` and `subexpressions` in the
beginning.
Also for simple kernels subexpressions are often not needed, since
intermediate symbols can also be set in main_assignments.
Subexpression should be kept for expert users.https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/1Address of SymPy-Function `address_of`2019-07-10T16:14:26+02:00Stephan SeitzAddress of SymPy-Function `address_of`Some CUDA functions (like `atomic_add`) require pointers to data. This PR adds a SymPy function representing the C address-of operator (`&`).
I tried to trigger cse to show a problem related to this function (dummy variables were not ...Some CUDA functions (like `atomic_add`) require pointers to data. This PR adds a SymPy function representing the C address-of operator (`&`).
I tried to trigger cse to show a problem related to this function (dummy variables were not typed correctly as pointer). I'll include the fix in a follow-up PR.https://i10git.cs.fau.de/pycodegen/pystencils/-/merge_requests/15implemented derivation of gradient weights via rotation2020-11-25T13:23:50+01:00Markus Holzerimplemented derivation of gradient weights via rotationderive gradient weights of other direction with
already calculated weights of one direction
via rotation and apply them to a field.derive gradient weights of other direction with
already calculated weights of one direction
via rotation and apply them to a field.