CMakeLists.txt 55.5 KB
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############################################################################################################################
##
## waLBerla's main cmake file
##
## Contents:
##   - definition of build options
##   - compiler variables ( c++ standard, warnings etc. ) 
##   - Finding of service libraries. Required: boost, Optional: MPI, PE, METIS
##     the include paths are set, and the libraries are added to variable SERVICE_LIBS
##   - Subdirectory cmake lists are called
##       -> src/   this folder contains all modules, each module (that contains c or cpp files) is linked to a 
##                 static library.  Dependencies between these shared libraries are tracked manually, 
##                 for more information see waLBerlaModuleDependencySystem.cmake
##       -> tests/ Same subdirectories as src/ folder. Contains tests for each module
##   - Export of variables into internal cache variables, for usage in applications or projects that use walberla as
##     subdirectory. Variables containing the service-libs, 
##
############################################################################################################################



############################################################################################################################
##
## Project name, version, Custom CMake functions
##
############################################################################################################################

CMAKE_MINIMUM_REQUIRED (VERSION 2.8)


PROJECT ( walberla ) 

set ( CMAKE_MODULE_PATH ${CMAKE_MODULE_PATH} ${walberla_SOURCE_DIR}/cmake )

include ( waLBerlaFunctions )

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set_version( 4 0 )
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if( CMAKE_VERSION VERSION_LESS 2.8.3 )
   include( CMakeParseArgumentsCompat )
else()
   include( CMakeParseArguments )
endif()
 
# Enable CTest
enable_testing()
include( CTest )

 
############################################################################################################################




############################################################################################################################
##
## Definition of build options
##
############################################################################################################################


# Build options
option ( WALBERLA_DOUBLE_ACCURACY           "Floating point accuracy, defaults to double"     ON )
option ( WALBERLA_ENABLE_GUI                "Compile with GUI"                                   )
                                                                                              
option ( WALBERLA_BUILD_TESTS               "Build Testcases"                                    )
option ( WALBERLA_BUILD_BENCHMARKS          "Build Benchmarks"                                ON )
option ( WALBERLA_BUILD_TOOLS               "Build Tools"                                        )
option ( WALBERLA_BUILD_TUTORIALS           "Build Tutorials"                                 ON )
                                                                                              
option ( WALBERLA_BUILD_WITH_MPI            "Build with MPI"                                  ON )
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option ( WALBERLA_BUILD_WITH_METIS          "Build with metis graph partitioner"             OFF )
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option ( WALBERLA_BUILD_WITH_GPROF          "Enables gprof"                                      )
option ( WALBERLA_BUILD_WITH_GCOV           "Enables gcov"                                       )
option ( WALBERLA_BUILD_WITH_LTO            "Enable link time optimizations"                     )
option ( WALBERLA_BUILD_WITH_OPENMP         "Enable OpenMP support"                              )  
option ( WALBERLA_BUILD_WITH_PYTHON         "Support for embedding Python"                       ) 
option ( WALBERLA_BUILD_WITH_PYTHON_MODULE  "Build waLBerla python module"                       )
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option ( WALBERLA_BUILD_WITH_PYTHON_LBM     "Include LBM module into python module"          OFF )

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option ( WALBERLA_BUILD_WITH_LIKWID_MARKERS "Compile in markers for likwid-perfctr"              )


option ( WALBERLA_BUILD_WITH_FASTMATH       "Fast math"                                          )
                                            
option ( WALBERLA_SIMD_FORCE_SCALAR         "Do not use SIMD operations even when available" OFF )
                                            
option ( WALBERLA_BUFFER_DEBUG              "Type checking for BufferSystem ( slow )"        OFF )

option ( WALBERLA_NO_OUTDATED_FEATURES      "Show warning/errors when outdated features "
                                            "(i.e. features that will be deprecated) are used"   )

# Profile guided optimization
option ( WALBERLA_PROFILE_GENERATE  "Generates Profile for Optimization"             )
option ( WALBERLA_PROFILE_USE       "Uses Profile to optimize"                       )

# Compiler Optimization
option ( WALBERLA_OPTIMIZE_FOR_LOCALHOST "Enable compiler optimizations spcific to localhost" )

# Installation Directory
set ( CMAKE_INSTALL_PREFIX /usr/local/waLBerla CACHE STRING "The default installation directory."   )

# Default build type
if ( NOT CMAKE_BUILD_TYPE )
    set ( CMAKE_BUILD_TYPE Release CACHE STRING "Build Types: Debug Release DebugOptimized RelWithDebInfo MinSizeRel."  FORCE )
endif()
SET_PROPERTY( CACHE CMAKE_BUILD_TYPE PROPERTY STRINGS Debug Release DebugOptimized RelWithDebInfo MinSizeRel )

# Debugging options                                      )
option ( WALBERLA_STL_BOUNDS_CHECKS  "Use debug capabilites of libstd++: iterator and bounds checks" ) 

# Warning options
option ( WARNING_DISABLE    "Disables additional compiler warnings"          OFF )
option ( WARNING_PEDANTIC   "Enables pedantic compiler warnings"             ON  )
option ( WARNING_ERROR      "Convert warnings to errors compiler warnings"   OFF )
option ( WARNING_DEPRECATED "Show warning when deprecated features are used" ON  )

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# Sanitizer options
option ( WALBERLA_SANITIZE_ADDRESS    "Enables address sanitizer in gcc and clang"            )
option ( WALBERLA_SANITIZE_UNDEFINED  "Enables undefined behavior sanitizer in gcc and clang" )
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# Every folder that is listed here can contain modules or tests
# this can be extended by applications to have own modules
# Here the src/ folder is added to this list, where all modules are located 
list( APPEND WALBERLA_MODULE_DIRS "${walberla_SOURCE_DIR}/src" "${walberla_SOURCE_DIR}/tests" )
list( REMOVE_DUPLICATES  WALBERLA_MODULE_DIRS )
set ( WALBERLA_MODULE_DIRS  ${WALBERLA_MODULE_DIRS} CACHE INTERNAL "All folders that contain modules or tests" )

############################################################################################################################


############################################################################################################################
##
## Compiler detection
##
############################################################################################################################

# Check for intel compiler
if( CMAKE_CXX_COMPILER MATCHES "icpc" OR CMAKE_CXX_COMPILER_ARG1 MATCHES "icpc" )
    option ( WALBERLA_CXX_COMPILER_IS_INTEL "Use Intel compiler" ON  )
    # Intel(R) Compiler has its own library archiver,
    # if you build libraries and do not use xiar,
    # the Intel compiler will complain about invalid
    # archives at the link phase.
    # The Intel(R) archiver is "xiar" usually
    # located in the same folder as the compiler,
    FIND_PROGRAM(XIAR xiar)
    IF(XIAR)
        SET(CMAKE_AR "${XIAR}")
    ENDIF(XIAR)
    MARK_AS_ADVANCED(XIAR)

    # Intel(R) Compiler also comes with its own linker
    # which provides a number of additional benefits when
    # linking code compiled with the Intel(R) compiler.
    # Again, usually in the same place as icc itself,
    FIND_PROGRAM(XILD xild)
    IF(XILD)
       SET(CMAKE_LINKER "${XILD}")
    ENDIF(XILD)
    MARK_AS_ADVANCED(XILD)
else()
    option ( WALBERLA_CXX_COMPILER_IS_INTEL "Use Intel compiler" OFF  )
endif()
mark_as_advanced ( WALBERLA_CXX_COMPILER_IS_INTEL )

# Check for Gnu compiler
if ( CMAKE_COMPILER_IS_GNUCXX  AND NOT WALBERLA_CXX_COMPILER_IS_INTEL )
     option ( WALBERLA_CXX_COMPILER_IS_GNU "Use gnu compiler" ON  )
else()
     option ( WALBERLA_CXX_COMPILER_IS_GNU "Use gnu compiler" OFF  )
endif()
mark_as_advanced ( WALBERLA_CXX_COMPILER_IS_GNU )
   
# Check for Visual Studio
if ( MSVC )
     option ( WALBERLA_CXX_COMPILER_IS_MSVC "Use Visual Studio compiler" ON  )
else()
     option ( WALBERLA_CXX_COMPILER_IS_MSVC "Use Visual Studio compiler" OFF  )
endif()
mark_as_advanced ( WALBERLA_CXX_COMPILER_IS_MSVC )

# Check for IBM compiler
if( CMAKE_CXX_COMPILER MATCHES "xlc" OR CMAKE_CXX_COMPILER_ARG1 MATCHES "xlc" )
    option ( WALBERLA_CXX_COMPILER_IS_IBM "Use IBM compiler" ON  )
else()
    option ( WALBERLA_CXX_COMPILER_IS_IBM "Use IBM compiler" OFF  )
endif()
mark_as_advanced ( WALBERLA_CXX_COMPILER_IS_IBM )

# Check for NEC SX compiler
if( CMAKE_CXX_COMPILER MATCHES "sxc" OR CMAKE_CXX_COMPILER_ARG1 MATCHES "sxc" OR CMAKE_CXX_COMPILER MATCHES "sxmpic" OR CMAKE_CXX_COMPILER_ARG1 MATCHES "sxmpic" )
    option ( WALBERLA_CXX_COMPILER_IS_NEC "Use NEC compiler" ON  )
else()
    option ( WALBERLA_CXX_COMPILER_IS_NEC "Use NEC compiler" OFF  )
endif()
mark_as_advanced ( WALBERLA_CXX_COMPILER_IS_NEC )

# Check for Clang compiler
if( CMAKE_CXX_COMPILER MATCHES "clang" OR CMAKE_CXX_COMPILER_ARG1 MATCHES "clang" OR CMAKE_CXX_COMPILER_ID STREQUAL "Clang" )
    option ( WALBERLA_CXX_COMPILER_IS_CLANG "Use clang compiler" ON  )
else()
    option ( WALBERLA_CXX_COMPILER_IS_CLANG "Use clang compiler" OFF  )
endif()
mark_as_advanced ( WALBERLA_CXX_COMPILER_IS_CLANG )

if( CMAKE_CXX_COMPILER_ID MATCHES Cray )
    option ( WALBERLA_CXX_COMPILER_IS_CRAY "Use Cray compiler" ON   )
    if(CMAKE_CXX_COMPILER_VERSION VERSION_LESS 8.4)
        message( FATAL_ERROR "Insufficient Cray Compiler Environment version" )
    endif()
else()
    option ( WALBERLA_CXX_COMPILER_IS_CRAY "Use Cray compiler" OFF  )
endif()
mark_as_advanced ( WALBERLA_CXX_COMPILER_IS_CRAY )

# Check for MPI wrapper
get_filename_component( CXX_COMPILER_WITHOUT_PATH ${CMAKE_CXX_COMPILER} NAME )
if( CXX_COMPILER_WITHOUT_PATH MATCHES "mpi" OR CMAKE_CXX_COMPILER_ARG1 MATCHES "mpi" )
    option ( WALBERLA_CXX_COMPILER_IS_MPI_WRAPPER "Compiler is MPI wrapper" ON  )
else()
    option ( WALBERLA_CXX_COMPILER_IS_MPI_WRAPPER "Compiler is MPI wrapper" OFF  )
endif()
mark_as_advanced ( WALBERLA_CXX_COMPILER_IS_MPI_WRAPPER )

############################################################################################################################



############################################################################################################################
##
## Compiler Setup
##
############################################################################################################################

# Profile guided optimization
if ( WALBERLA_PROFILE_GENERATE )
    if( WALBERLA_CXX_COMPILER_IS_INTEL )
        add_flag( CMAKE_CXX_FLAGS "-prof-gen" )
        file( MAKE_DIRECTORY "${CMAKE_BINARY_DIR}/profile" )
        add_flag( CMAKE_CXX_FLAGS "-prof-dir${CMAKE_BINARY_DIR}/profile" )
    elseif( WALBERLA_CXX_COMPILER_IS_GNU )
        add_flag( CMAKE_CXX_FLAGS "-fprofile-generate" )
    elseif( WALBERLA_CXX_COMPILER_IS_MSVC )
      add_flag ( CMAKE_CXX_FLAGS           "/GL"                )
      add_flag ( CMAKE_MODULE_LINKER_FLAGS "/LTCG:PGINSTRUMENT" )
      add_flag ( CMAKE_SHARED_LINKER_FLAGS "/LTCG:PGINSTRUMENT" )
      add_flag ( CMAKE_EXE_LINKER_FLAGS    "/LTCG:PGINSTRUMENT" )
    endif()
endif()

if ( WALBERLA_PROFILE_USE )
    if( WALBERLA_CXX_COMPILER_IS_INTEL )
       add_flag( CMAKE_CXX_FLAGS "-prof-use" )
       add_flag( CMAKE_CXX_FLAGS "-prof-dir${CMAKE_BINARY_DIR}/profile" )
    elseif( WALBERLA_CXX_COMPILER_IS_GNU )
       add_flag( CMAKE_CXX_FLAGS "-fprofile-use" )
    elseif( WALBERLA_CXX_COMPILER_IS_MSVC )
      add_flag ( CMAKE_CXX_FLAGS           "/GL"              )
      add_flag ( CMAKE_MODULE_LINKER_FLAGS "/LTCG:PGOPTIMIZE" )
      add_flag ( CMAKE_SHARED_LINKER_FLAGS "/LTCG:PGOPTIMIZE" )
      add_flag ( CMAKE_EXE_LINKER_FLAGS    "/LTCG:PGOPTIMIZE" )
    endif()
endif()

# common flags for intel and g++
if( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_INTEL )
   if( CMAKE_CXX_COMPILER_VERSION VERSION_LESS 4.7 )
      add_flag ( CMAKE_CXX_FLAGS "-std=c++0x" )
   else()
      add_flag ( CMAKE_CXX_FLAGS "-std=c++11" )
   endif()
   #add_flag ( CMAKE_C_FLAGS   "-std=c99" )
   add_flag ( CMAKE_CXX_FLAGS "-Wall -Wconversion -Wshadow" )
endif()

# C++11 language features for IBM compiler
if( WALBERLA_CXX_COMPILER_IS_IBM )
   add_flag ( CMAKE_CXX_FLAGS "-qlanglvl=autotypededuction -qlanglvl=decltype -qlanglvl=static_assert -qlanglvl=rightanglebracket -qlanglvl=c99longlong" )
endif()

# C++11 language features for Cray compiler
if( WALBERLA_CXX_COMPILER_IS_CRAY )
   add_flag ( CMAKE_CXX_FLAGS "-hstd=c++11" )
endif()

# C++11 language features for NEC compiler
if( WALBERLA_CXX_COMPILER_IS_NEC )
   add_flag ( CMAKE_CXX_FLAGS "-Kcpp11 -Krtti -Kexceptions -size_t64 -Kgcc" )
   add_flag ( CMAKE_CXX_FLAGS "-D__BIG_ENDIAN -D__BYTE_ORDER=__BIG_ENDIAN" )
   add_flag ( CMAKE_CXX_FLAGS "-Tnoauto,used" )
   add_flag ( CMAKE_EXE_LINKER_FLAGS "-Wl,-h,muldefs" )
   add_flag ( CMAKE_C_FLAGS "-size_t64 -Kgcc" )
   add_flag ( CMAKE_C_FLAGS "-D__BIG_ENDIAN -D__BYTE_ORDER=__BIG_ENDIAN" )
   add_flag ( CMAKE_C_FLAGS "-DSQLITE_OMIT_WAL -DHAVE_UTIME -DTHREADSAFE=0" )
   set( CMAKE_RANLIB /bin/true )
   set( CMAKE_SKIP_BUILD_RPATH TRUE )
   set( CMAKE_C_FLAGS_DEBUGOPTIMIZED    "-Chopt -g"                               )
   set( CMAKE_C_FLAGS_DEBUG             "-Cdebug -g"                              )
   set( CMAKE_CXX_FLAGS_DEBUGOPTIMIZED  "-Chopt -g"                               )
   set( CMAKE_CXX_FLAGS_DEBUG           "-Cdebug -g"                              )
endif()

# Fixes linker errors with IBM compiler
if( WALBERLA_CXX_COMPILER_IS_IBM )
   add_flag ( CMAKE_CXX_FLAGS "-qpic=large" )
endif()
# Fixes linker errors with Cray compiler
if( WALBERLA_CXX_COMPILER_IS_CRAY )
   add_flag ( CMAKE_EXE_LINKER_FLAGS  "-dynamic -L/opt/gcc/4.9.3/snos/lib64" )
endif()

# Silences compiler and linker warnings and information with the IBM compiler
if( WALBERLA_CXX_COMPILER_IS_IBM )
   add_flag ( CMAKE_CXX_FLAGS "-qsuppress=1586-267" )  # 1586-267 (I) Inlining of specified subprogram failed due to the presence of a C++ exception handler
   add_flag ( CMAKE_CXX_FLAGS "-qsuppress=1586-266" )  # 1586-266 (I) Inlining of specified subprogram failed due to the presence of a global label
   add_flag ( CMAKE_CXX_FLAGS "-qsuppress=1540-0724" ) # 1540-0724 (W) The non-type template argument "2147483648" of type "T" has wrapped [coming from boost/integer_traits.hpp]
   add_flag ( CMAKE_CXX_FLAGS "-qsuppress=1540-0095" ) # 1540-0095 (W) The friend function declaration ... [coming from boost/mpl/map/aux_/map0.hpp]
   add_flag ( CMAKE_CXX_FLAGS "-qsuppress=1500-030" )  # 1500-030: (I) INFORMATION: [...] Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192.
   add_flag ( CMAKE_C_FLAGS "-qsuppress=1500-030" )    # 1500-030: (I) INFORMATION: [...] Additional optimization may be attained by recompiling and specifying MAXMEM option with a value greater than 8192.
endif()

# Silences compiler and linker warnings and information with the Cray compiler
if( WALBERLA_CXX_COMPILER_IS_CRAY )
   set( CMAKE_INCLUDE_SYSTEM_FLAG_CXX "-isystem " )
   add_flag ( CMAKE_CXX_FLAGS "-h nomessage=1" )      # CC-1    The source file does not end with a new-line character.
   add_flag ( CMAKE_C_FLAGS   "-DSQLITE_HAVE_ISNAN" ) # SQLite will not work correctly with the -ffast-math option of GCC.
   add_flag ( CMAKE_CXX_FLAGS "-DSQLITE_HAVE_ISNAN" ) # SQLite will not work correctly with the -ffast-math option of GCC.
endif()

# architecture optimization
if( WALBERLA_OPTIMIZE_FOR_LOCALHOST )
   if( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_INTEL OR WALBERLA_CXX_COMPILER_IS_CLANG )
      add_flag ( CMAKE_CXX_FLAGS "-march=native" )
      add_flag ( CMAKE_C_FLAGS   "-march=native" )
      if( WALBERLA_CXX_COMPILER_IS_INTEL )
        add_flag ( CMAKE_CXX_FLAGS "-xhost" )
        add_flag ( CMAKE_C_FLAGS   "-xhost" )
      endif()
   endif()
endif() 

# warning flags 
if( WALBERLA_CXX_COMPILER_IS_INTEL )
   # system headers are also supported by intel, but cmake does not recognize that
   set( CMAKE_INCLUDE_SYSTEM_FLAG_CXX "-isystem " )
   add_flag ( CMAKE_CXX_FLAGS "-wd2928,2504,2259,1682,597" )
elseif( WALBERLA_CXX_COMPILER_IS_GNU )
   add_flag ( CMAKE_CXX_FLAGS "-Wfloat-equal -Wextra" ) 
elseif( WALBERLA_CXX_COMPILER_IS_NEC )
   add_flag ( CMAKE_CXX_FLAGS "-wall" )
endif()

if ( WARNING_PEDANTIC AND WALBERLA_CXX_COMPILER_IS_GNU )
   add_flag ( CMAKE_CXX_FLAGS "-pedantic" )                     
endif ( )
      
 # omit deprecated warnings
if( NOT WARNING_DEPRECATED) 
   if( WALBERLA_CXX_COMPILER_IS_INTEL )
       add_flag( CMAKE_CXX_FLAGS "-wd1478" )  # Disable compiler warning # 1478: "declared as deprecated"
   elseif( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_CLANG )
       add_flag ( CMAKE_CXX_FLAGS "-Wno-deprecated-declarations")
   endif()
endif()
   
# Treat warnings as errors
if ( WARNING_ERROR )
   if( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_INTEL OR WALBERLA_CXX_COMPILER_IS_CLANG )
      add_flag ( CMAKE_CXX_FLAGS "-pedantic-errors -Werror" )
   elseif( WALBERLA_CXX_COMPILER_IS_MSVC )
      add_flag ( CMAKE_CXX_FLAGS "/WX" )
   elseif ( WALBERLA_CXX_COMPILER_IS_CRAY )
      add_flag ( CMAKE_CXX_FLAGS "-h error_on_warning" )
   endif()
endif ( )


if ( WALBERLA_CXX_COMPILER_IS_CLANG )
    add_flag ( CMAKE_CXX_FLAGS "-Wall -Wconversion -Wshadow -Wno-c++11-extensions -std=c++11 -Qunused-arguments" )
    add_flag ( CMAKE_CXX_FLAGS "-D'_LIBCPP_EXTERN_TEMPLATE(...)='")
endif ( )

if( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_INTEL OR WALBERLA_CXX_COMPILER_IS_CLANG )
    if ( WALBERLA_STL_BOUNDS_CHECKS )
        add_definitions ( "-D_GLIBCXX_DEBUG" )
    endif()
endif()


#fastmath
if ( WALBERLA_BUILD_WITH_FASTMATH )
    if ( WALBERLA_CXX_COMPILER_IS_INTEL )
        add_flag( CMAKE_CXX_FLAGS "-fp-model fast=2 -no-prec-sqrt -no-prec-div" )
    endif()
    
    if ( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_CLANG )
        add_flag( CMAKE_CXX_FLAGS "-ffast-math")
    endif()
    
    if( WALBERLA_CXX_COMPILER_IS_MSVC )
        add_flag( CMAKE_CXX_FLAGS "/fp:fast" )
    endif()
endif() 

# Xcode generator disables -isystem flag, even though current versions of Xcode support it
if(CMAKE_GENERATOR STREQUAL "Xcode")
    set(CMAKE_INCLUDE_SYSTEM_FLAG_C "-isystem ")
    set(CMAKE_INCLUDE_SYSTEM_FLAG_CXX "-isystem ")
endif()


#GCC 5+ ABI selection
if( WALBERLA_CXX_COMPILER_IS_GNU )
   if( NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS 5.0.0 )
      option ( WALBERLA_USE_CPP11_ABI "On GCC 5+ use the C++11 ABI" ON )
      if( WALBERLA_USE_CPP11_ABI )
         add_flag( CMAKE_CXX_FLAGS "-D_GLIBCXX_USE_CXX11_ABI=1" )
      else()
         add_flag( CMAKE_CXX_FLAGS "-D_GLIBCXX_USE_CXX11_ABI=0" )
      endif()
   endif()
endif()


# disable Xcode 7.3+ linker deduplication pass to speed up linking in debug mode
if ( APPLE )
   execute_process( COMMAND ${CMAKE_LINKER} -v OUTPUT_VARIABLE LINKER_VERSION ERROR_VARIABLE LINKER_VERSION )
   string( REGEX MATCH "ld64-[0-9\\.\\-]+" LINKER_VERSION ${LINKER_VERSION} )
   string( REGEX MATCHALL "[^\\-]+" LINKER_VERSION ${LINKER_VERSION} )
   list( GET LINKER_VERSION 0 LINKER_TYPE )
   list( GET LINKER_VERSION 1 LINKER_VERSION )
   if( LINKER_TYPE STREQUAL "ld64" AND LINKER_VERSION VERSION_GREATER 264.3.101 )
       add_flag( CMAKE_EXE_LINKER_FLAGS_DEBUG    "-Wl,-no_deduplicate")
       add_flag( CMAKE_MODULE_LINKER_FLAGS_DEBUG "-Wl,-no_deduplicate")
       add_flag( CMAKE_SHARED_LINKER_FLAGS_DEBUG "-Wl,-no_deduplicate")
   endif()
endif()


############################################################################################################################



############################################################################################################################
##
##  Visual Studio Setup
##
############################################################################################################################
if ( WALBERLA_CXX_COMPILER_IS_MSVC )
   string( REGEX REPLACE "[/-]W[0-4]" "" CMAKE_CXX_FLAGS ${CMAKE_CXX_FLAGS} ) # remove default warning flags

   option ( WALBERLA_GROUP_PROJECTS   "Flag if the projects are grouped or in a flat hierarchy"    ON )
   option ( WALBERLA_GROUP_FILES      "Flag if the files are grouped or in a flat hierarchy"       ON )
   set_property ( GLOBAL PROPERTY USE_FOLDERS ${WALBERLA_GROUP_PROJECTS} )

   option ( WALBERLA_VS_MULTI_PROCESS_BUILD "Use the /mp option for VS builds" ON )
   if( WALBERLA_VS_MULTI_PROCESS_BUILD )
      add_flag ( CMAKE_CXX_FLAGS "-MP" ) # enable multi-threaded compiling
   endif()
   
   add_definitions ( "-DNOMINMAX" )                # Disable Min/Max-Macros
   add_definitions ( "-D_WIN32_WINNT=0x501" )      # Minimum Windows versions is Windows XP
   add_definitions ( "-DWINVER=0x501" )            # Minimum Windows versions is Windows XP
   add_definitions ( "-D_CRT_SECURE_NO_WARNINGS" ) # disable warnings promoting Microsoft's security enhanced CRT
   add_definitions ( "-D_SCL_SECURE_NO_WARNINGS" ) # disable warnings triggered by Microsoft's checked iterators
   add_flag ( CMAKE_CXX_FLAGS "-W4" )              # set warning level to maximum  
   add_flag ( CMAKE_CXX_FLAGS "-bigobj" )          # enable big object files
   add_flag ( CMAKE_CXX_FLAGS "-wd4127" )          # disable compiler warning C4127: "conditional expression is constant"
   add_flag ( CMAKE_CXX_FLAGS "-wd4512" )          # disable compiler warning C4512: "assignment operator could not be generated"
   add_flag ( CMAKE_CXX_FLAGS "-wd4913" )          # disable compiler warning C4512: "user defined binary operator ',' exists but 
                                                   # no overload could convert all operands, default built-in binary operator ','
                                                   # used"
   add_flag ( CMAKE_CXX_FLAGS "-wd4702" )          # disable compiler warning C4702: "unreachable code"
   add_flag ( CMAKE_CXX_FLAGS "-wd4505" )          # disable compiler warning C4505: "unreferenced local function has been removed"
   add_flag ( CMAKE_CXX_FLAGS "-wd4503" )          # disable compiler warning C4503: "'identifier' : decorated name length exceeded, name was truncated"
      
   if ( WARNING_ERROR )
      add_flag ( CMAKE_CXX_FLAGS "-WX" )           # Treat warnings as errors
   endif ( )
   
   if( NOT WARNING_DEPRECATED)
      add_definitions( "-D_CRT_SECURE_NO_DEPRECATE" )
      add_definitions( "-D_SCL_SECURE_NO_DEPRECATE" )
      add_flag       ( CMAKE_CXX_FLAGS "-wd4996"    ) # Disable compiler warning C4996: "declared as deprecated"
   endif()
   
endif ( )
############################################################################################################################




############################################################################################################################
##
## Python Libraries
##
#############################################################################################################################
if ( WALBERLA_BUILD_WITH_PYTHON )
    
    set ( waLBerla_REQUIRED_MIN_PYTHON_VERSION "2.7")
    if( WALBERLA_CXX_COMPILER_IS_MSVC )
        find_package( PythonLibs QUIET REQUIRED)
    else()
        # For Linux the standard find script does not work properly:
        # Python is configured here using the command "python-config" which has to be on the PATH
        if ( NOT PYTHONLIBS_VERSION_STRING )
           find_program( PYTHON_CONFIG_EXE NAMES python3.5m-config python3.5-config 
                                                 python3.4m-config python3.4-config 
                                                 python3.3m-config python3.3-config  
                                                 python3m-config python3-config
                                                 python2.7-config
                                                 python2-config python-config )
           if ( NOT PYTHON_CONFIG_EXE )
               message( WARNING "Found python but no python-config, python-devel package not installed?" )
           else()  
               execute_process( COMMAND ${PYTHON_CONFIG_EXE} --includes OUTPUT_VARIABLE PYTHON_INCLUDES   )
               separate_arguments( PYTHON_INCLUDES )
               list(GET PYTHON_INCLUDES 0  PYTHON_INCLUDES )
               string( REGEX REPLACE "[-][I]([^ ]+)" "\\1" PYTHON_INCLUDE_DIR ${PYTHON_INCLUDES} )
               set ( PYTHON_INCLUDE_DIR ${PYTHON_INCLUDE_DIR} CACHE PATH "Python include directory" FORCE )
               string( REPLACE "-config" "" PYTHON_EXE ${PYTHON_CONFIG_EXE} )
               execute_process( COMMAND ${PYTHON_EXE} --version OUTPUT_VARIABLE PYTHONLIBS_VERSION_STRING ERROR_VARIABLE PYTHONLIBS_VERSION_STRING )
               string( REPLACE "Python " "" PYTHONLIBS_VERSION_STRING ${PYTHONLIBS_VERSION_STRING} )
           endif()
        endif()
        
        if ( NOT PYTHON_LIBRARY )
           execute_process( COMMAND ${PYTHON_CONFIG_EXE} --libs    OUTPUT_VARIABLE PYTHON_LIB     OUTPUT_STRIP_TRAILING_WHITESPACE  )
           execute_process( COMMAND ${PYTHON_CONFIG_EXE} --ldflags OUTPUT_VARIABLE PYTHON_LIB_DIR OUTPUT_STRIP_TRAILING_WHITESPACE  )
           string( REGEX MATCH "(-lpython[0-9a-z.-]*)" PYTHON_LIB ${PYTHON_LIB} )
           string( REGEX REPLACE "[-][l]([^ ]+)" "\\1" PYTHON_LIB     "${PYTHON_LIB}"     )
           # take everything that "python-config --ldflags" gives us,  remove "-L" and give it to find_library as possible paths
           # in this output there are also linker flags that are not paths but find_library can handle this 
           # overall this seems the most robust method           
           string( REPLACE "-L" "" PYTHON_LIB_DIR  ${PYTHON_LIB_DIR} ) 
           separate_arguments( PYTHON_LIB_DIR )
           find_library( PYTHON_LIBRARY NAMES ${PYTHON_LIB}  
                          PATHS ${PYTHON_LIB_DIR} /usr/lib /usr/lib64 PATH_SUFFIXES lib lib64 NO_DEFAULT_PATH )
        endif()
    endif()
	
    if( PYTHONLIBS_VERSION_STRING VERSION_LESS ${waLBerla_REQUIRED_MIN_PYTHON_VERSION} )
        message( FATAL_ERROR "Found old python library: ${PYTHONLIBS_VERSION_STRING} need at least ${waLBerla_REQUIRED_MIN_PYTHON_VERSION}" )
    endif()
    
    option( WALBERLA_USE_PYTHON_DEBUG_LIBRARY "Make use of the python debug library" OFF )
    
    if( WALBERLA_USE_PYTHON_DEBUG_LIBRARY )
      # you have to make sure this matches the settings you compiled boost with!
      add_definitions( "-DBOOST_DEBUG_PYTHON" )
    endif()
    
    if( NOT (PYTHON_LIBRARY AND PYTHON_INCLUDE_DIR ) )
        message( FATAL_ERROR "Couldn't find any python library" )
    endif()
    
    SET( WALBERLA_BUILD_WITH_PYTHON 1 )
    include_directories( ${PYTHON_INCLUDE_DIR} )
    list ( APPEND SERVICE_LIBS ${PYTHON_LIBRARY} )
    
    if( NOT WALBERLA_CXX_COMPILER_IS_MSVC )
        list ( APPEND SERVICE_LIBS -lutil )
    endif()
    
    if ( WALBERLA_BUILD_WITH_PYTHON_MODULE )
        # a python module is a shared library - so everything has to be compiled to position independent code
        # otherwise linking the static libs into the shared lib will result in errors 
        if( NOT WALBERLA_CXX_COMPILER_IS_MSVC )
            add_flag ( CMAKE_CXX_FLAGS "-fPIC" )
            add_flag ( CMAKE_C_FLAGS "-fPIC" )
        endif()
    endif()
        
    if( MSVC10 )
        include(CMakeDependentOption)
        CMAKE_DEPENDENT_OPTION( PYTHON_FIXED_HYPOT_REDEFINITION "fixed _hypot redefinition by python" OFF "WALBERLA_BUILD_WITH_PYTHON" OFF )
        if( NOT PYTHON_FIXED_HYPOT_REDEFINITION )
            message( WARNING "Make sure you modified your pyconfig.h that _hypot is not redefined -> see: http://connect.microsoft.com/VisualStudio/feedback/details/633988/warning-in-math-h-line-162-re-nonstandard-extensions-used" )
        endif()
    endif()
    

    # Sphinx documentation
    # to build documentation make sure to have sphinx and read-the-docs theme installed
    # Install with: "pip install sphinx sphinx_rtd_theme"
    add_custom_target( docPython sphinx-build -b html "${walberla_SOURCE_DIR}/python/waLBerla_docs" "${walberla_BINARY_DIR}/doc/python"
                       COMMENT "Building HTML documentation for Python extension with Sphinx")
    
endif()


############################################################################################################################
##
## BOOST Libraries
##
#############################################################################################################################
set ( waLBerla_REQUIRED_MIN_BOOST_VERSION "1.48")

option ( WALBERLA_BUILD_WITH_BOOST_THREAD "Build with boost thread library support" ON )
# There have been problems with the IBM compiler and boost thread, so WALBERLA_BUILD_WITH_BOOST_THREAD is disabled by default for this compiler
if( WALBERLA_CXX_COMPILER_IS_IBM )
   set ( WALBERLA_BUILD_WITH_BOOST_THREAD OFF CACHE BOOL "Build with boost thread library support" FORCE )
endif()

if ( WALBERLA_BUILD_WITH_BOOST_THREAD )
   list ( APPEND waLBerla_REQUIRED_BOOST_COMPONENTS chrono filesystem system thread regex )
else ()
   list ( APPEND waLBerla_REQUIRED_BOOST_COMPONENTS chrono filesystem system regex )
endif ()

if ( WALBERLA_BUILD_WITH_PYTHON AND WALBERLA_CXX_COMPILER_IS_MSVC )
    list( APPEND waLBerla_REQUIRED_BOOST_COMPONENTS python )
endif()

# This variable is necessary, if the CMAKE version used is not aware of a more recent boost version (keep this up to date!)
set ( Boost_ADDITIONAL_VERSIONS
      "1.45" "1.45.0" "1.46" "1.46.0" "1.46.1" "1.47" "1.47.0" "1.48" "1.48.0" "1.49" "1.49.0" 
      "1.50" "1.50.0" "1.51" "1.51.0" "1.52" "1.52.0" "1.53" "1.53.0" "1.54" "1.54.0" "1.55" "1.55.0" 
      "1.56" "1.56.0" "1.57" "1.57.0" "1.58" "1.58.0" "1.59" "1.59.0" "1.60" "1.60.0" "1.61" "1.61.0" "1.62" "1.62.0" "1.63" "1.63.0")

set ( Boost_USE_STATIC_LIBS    OFF CACHE BOOL "Use boost static libraries" )
set ( Boost_USE_MULTITHREADED  OFF CACHE BOOL "Use boost multithreaded libraries" )
set ( Boost_USE_STATIC_RUNTIME OFF CACHE BOOL "Use boost libraries statically linked to runtime libs" )

# if you defined BOOST_ROOT or BOOST_BASE in your environment use it here to find boost too
if ( NOT BOOST_ROOT )
   foreach ( var  BOOST_ROOT  BOOST_BASE )
      if ( NOT "$ENV{${var}}" STREQUAL "" )
         message ( STATUS "Use environment boost directory: $ENV{${var}}" )
         set ( BOOST_ROOT $ENV{${var}} CACHE INTERNAL "")
         break ( )
      endif ( )
   endforeach ( )
endif ( ) 

find_package ( Boost ${waLBerla_REQUIRED_MIN_BOOST_VERSION} COMPONENTS ${waLBerla_REQUIRED_BOOST_COMPONENTS} QUIET )

if( NOT Boost_FOUND )
   message ( WARNING 
      "The specified configuration of the BOOST libraries was not found on your system! Now trying some other configuration..." )
   foreach ( Boost_USE_STATIC_LIBS ON OFF )
      foreach ( Boost_USE_MULTITHREADED ON OFF )
         find_package ( Boost ${waLBerla_REQUIRED_MIN_BOOST_VERSION} COMPONENTS ${waLBerla_REQUIRED_BOOST_COMPONENTS} QUIET )
         if ( Boost_FOUND )
            set ( Boost_USE_STATIC_LIBS   ${Boost_USE_STATIC_LIBS}   CACHE BOOL "Use boost static libraries"        FORCE )
            set ( Boost_USE_MULTITHREADED ${Boost_USE_MULTITHREADED} CACHE BOOL "Use boost multithreaded libraries" FORCE )
            set ( Boost_USE_MULTITHREADED_LIBRARY ${Boost_USE_MULTITHREADED} )
            message ( STATUS "Working configuration of the BOOST libraries was found :o)!" )
            message ( STATUS "Boost_USE_STATIC_LIBS and Boost_USE_MULTITHREADED was adapted accordingly." )
            BREAK ( )
         endif ( Boost_FOUND )
      endforeach ( Boost_USE_MULTITHREADED )
      if ( Boost_FOUND )
         BREAK ( )
      endif ( Boost_FOUND )
   endforeach ( Boost_USE_STATIC_LIBS )
endif ( NOT Boost_FOUND )

if ( Boost_FOUND )
   if(CMAKE_GENERATOR STREQUAL "Xcode")
      # this is needed because the SYSTEM flag to include_directories does not work
      add_flag ( CMAKE_CXX_FLAGS "-isystem ${Boost_INCLUDE_DIRS}" )
   else()
      include_directories ( SYSTEM ${Boost_INCLUDE_DIRS} )
   endif()
   link_directories ( ${Boost_LIBRARY_DIRS} )
   list ( APPEND SERVICE_LIBS ${Boost_LIBRARIES} )
   add_definitions ( -DBOOST_ALL_NO_LIB ) # Disable Boost auto-linking (CMAKE does that for us...)
   
   #fix for static lib usage: http://stackoverflow.com/questions/11812463/boost-python-link-errors-under-windows-msvc10
   if( PYTHONLIBS_FOUND AND Boost_USE_STATIC_LIBS)
      add_definitions( -DBOOST_PYTHON_STATIC_LIB )
   endif()
   
   #fix for strange link behaviour of boost to python: boost only links to 'pyhton*.lib' and not to the absolute path
   if( WIN32 AND PYTHONLIBS_FOUND )
      get_filename_component( PYTHON_LIBRARY_DIR ${PYTHON_INCLUDE_DIR} PATH )
      link_directories( ${PYTHON_LIBRARY_DIR}/libs )
      list( APPEND LINK_DIRS ${PYTHON_LIBRARY_DIR}/libs )
   endif()

else( Boost_FOUND )
   # Search again, this time with the REQUIRED option. This will give a CMAKE error and a detailed error message for the user
   find_package ( Boost ${waLBerla_REQUIRED_MIN_BOOST_VERSION} REQUIRED ${waLBerla_REQUIRED_BOOST_COMPONENTS} )
endif( Boost_FOUND )


# Check if Python3 found and look for according boost python library
if ( WALBERLA_BUILD_WITH_PYTHON AND NOT WALBERLA_CXX_COMPILER_IS_MSVC)
    SET(_boost_MULTITHREADED "")
    if (Boost_USE_MULTITHREADED OR Boost_USE_MULTITHREADED_LIBRARY)
        SET(_boost_MULTITHREADED "-mt")
    endif()
    if( PYTHON_LIBRARY MATCHES "python3" )
        find_library( BOOST_PYTHON_LIBRARY NAMES
                boost_python-py36${_boost_MULTITHREADED} boost_python-py35${_boost_MULTITHREADED}
                boost_python-py34${_boost_MULTITHREADED} boost_python-py33${_boost_MULTITHREADED}
                boost_python-py32${_boost_MULTITHREADED} boost_python3${_boost_MULTITHREADED}
                boost_python${_boost_MULTITHREADED}
                PATHS ${Boost_LIBRARY_DIRS} NO_DEFAULT_PATH )
    else()
        find_library( BOOST_PYTHON_LIBRARY NAMES boost_python${_boost_MULTITHREADED}
                      PATHS ${Boost_LIBRARY_DIRS} NO_DEFAULT_PATH )
    endif()
    message(STATUS "Using Boost Python Library ${BOOST_PYTHON_LIBRARY}" )
    list ( APPEND SERVICE_LIBS ${BOOST_PYTHON_LIBRARY} )
endif()


############################################################################################################################





############################################################################################################################
##
## PThread is required in Linux environments by boost::thread
##
############################################################################################################################

if ( NOT WIN32 AND WALBERLA_BUILD_WITH_BOOST_THREAD )
   add_flag( CMAKE_CXX_FLAGS "-pthread" )
endif()



############################################################################################################################
##
## MPI
##
############################################################################################################################

if ( WALBERLA_BUILD_WITH_MPI AND NOT WALBERLA_CXX_COMPILER_IS_MPI_WRAPPER ) 
   find_package ( MPI )
    
   # FindMPI does not really work under windows, because it expects linux formatted strings from the mpi compiler.
   # Nevertheless for Microsoft MPI and MPICH there are workarounds included, but not for OpenMPI.
   # Here is a workaround for windows with OpenMPI (use configure twice to see correct output).
   # The workaround bases on the elseif(try_libs) case in the interrogate_* function of FindMPI.
   # For this workaround we assume, that the compiler was found in any PATH or ENV variable
   # but FindMPI was not able to interpret the command line outputs.
   if ( MPI_CXX_COMPILER AND NOT MPI_CXX_LIBRARIES )
      if ( WIN32 )
         message ( STATUS "Enter Workaround Routine for Windows and OpenMPI: PRESS CONFIGURE ONE MORE TIME!" )
         string ( REGEX REPLACE "(.*)/bin/.*" "\\1" MPI_PATH ${MPI_CXX_COMPILER} )
         find_path ( MPI_INCLUDE_PATH mpi.h
            HINTS ${MPI_PATH}
            PATH_SUFFIXES include Inc)
         set ( MPI_CXX_INCLUDE_PATH ${MPI_INCLUDE_PATH} CACHE FILEPATH "" FORCE )
         set ( MPI_C_INCLUDE_PATH   ${MPI_INCLUDE_PATH} CACHE FILEPATH "" FORCE )

         set ( MPI_CXX_LIBRARIES "MPI_CXX_LIBRARIES-NOTFOUND" CACHE FILEPATH "Cleared" FORCE )
         find_library ( MPI_CXX_LIBRARIES
            NAMES         mpi++ mpicxx cxx mpi_cxx libmpi++ libmpicxx libcxx libmpi_cxx
            HINTS         ${MPI_PATH}
            PATH_SUFFIXES lib )
         set ( MPI_LIBRARY "MPI_CXX_LIBRARIES" CACHE FILEPATH "" FORCE )

         if ( NOT MPI_CXX_LIBRARIES STREQUAL "MPI_CXX_LIBRARIES-NOTFOUND" )
            set ( MPI_CXX_FOUND ON FORCE )
         endif ( )
         
         set ( MPI_C_LIBRARIES "MPI_C_LIBRARIES-NOTFOUND" CACHE FILEPATH "Cleared" FORCE )
         find_library ( MPI_C_LIBRARIES
           NAMES         mpi mpich mpich2 msmpi libmpi libmpich libmpich2 libmsmpi
           HINTS         ${MPI_PATH}
           PATH_SUFFIXES lib )
         set ( MPI_EXTRA_LIBRARY "MPI_C_LIBRARIES" CACHE FILEPATH "" FORCE )
         
         if ( NOT MPI_C_LIBRARIES STREQUAL "MPI_C_LIBRARIES-NOTFOUND" )
            set ( MPI_C_FOUND ON FORCE )
         endif ( )
         
         if ( MPI_PATH MATCHES ".*OpenMPI.*" )
            set ( MPI_CXX_COMPILE_FLAGS "/DOMPI_IMPORTS" CACHE STRING "" FORCE )
            set ( MPI_C_COMPILE_FLAGS   "/DOMPI_IMPORTS" CACHE STRING "" FORCE )
         endif ( )
      elseif ( WALBERLA_CXX_COMPILER_IS_CRAY )
      else ( )
         message ( WARNING "Found MPI Compiler but no Libraries -> invent a new workaround" )
      endif ( )
   endif ( ) 
   
   if ( MPI_FOUND ) 
       if ( MPI_CXX_FOUND )
         include_directories ( SYSTEM ${MPI_CXX_INCLUDE_PATH} ${MPI_C_INCLUDE_PATH} )
         foreach( LIB ${MPI_C_LIBRARIES} ${MPI_CXX_LIBRARIES} )
           if ( LIB )
              list ( APPEND SERVICE_LIBS ${LIB} )
           endif ( )
         endforeach ( )
         add_flag ( CMAKE_CXX_FLAGS "${MPI_CXX_COMPILE_FLAGS}" )
         add_flag ( CMAKE_C_FLAGS   "${MPI_C_COMPILE_FLAGS}" )
      else ( ) # For older CMake versions
         include_directories ( SYSTEM ${MPI_INCLUDE_PATH} )
         list ( APPEND SERVICE_LIBS ${MPI_LIBRARY} )
         if ( MPI_EXTRA_LIBRARY )
            list ( APPEND SERVICE_LIBS ${MPI_EXTRA_LIBRARY} )
         endif ( )
         add_flag ( CMAKE_C_FLAGS "${MPI_COMPILE_FLAGS}" )
      endif ( )
      
     add_flag ( CMAKE_MODULE_LINKER_FLAGS "${MPI_CXX_LINK_FLAGS}" )
     add_flag ( CMAKE_EXE_LINKER_FLAGS    "${MPI_CXX_LINK_FLAGS}" )
     add_flag ( CMAKE_SHARED_LINKER_FLAGS "${MPI_CXX_LINK_FLAGS}" )
      
     # When using Intel MPI, mpi.h has to be included before including the standard library
     # therefore we use the -include flag to enforce this.
     if ( MPI_INCLUDE_PATH MATCHES "intel" )
         message (STATUS "Activating IntelMPI include workaround for mpi.h" )
         add_flag ( CMAKE_CXX_FLAGS "-include mpi.h" )
         add_flag ( CMAKE_C_FLAGS   "-include mpi.h" )
     endif ( )
   endif ( )
endif ( )
############################################################################################################################



############################################################################################################################
##
## Qt
##
############################################################################################################################
option (WALBERLA_ENABLE_GUI "This flag builds the graphical user interface, depends on Qt Libraries")

if ( WALBERLA_ENABLE_GUI )

    find_package( Qt4 COMPONENTS QtCore QtGui QtOpenGL QtXml REQUIRED )
    find_package( OpenGL REQUIRED )
    
    INCLUDE( ${QT_USE_FILE} )
    list ( APPEND SERVICE_LIBS ${OPENGL_LIBRARIES} ${QT_LIBRARIES} )
    
    # Workaround for Qt4 moc and newer boost versions - moc cannot parse BOOST_JOIN
    # so additional defines are passed to the moc compiler that prevent the problematic header to be parsed
    set( QT_MOC_EXECUTABLE ${QT_MOC_EXECUTABLE} -DBOOST_NO_TEMPLATE_PARTIAL_SPECIALIZATION -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED ) 
    
endif(WALBERLA_ENABLE_GUI)

############################################################################################################################



############################################################################################################################
##
## METIS
##
############################################################################################################################

if ( WALBERLA_BUILD_WITH_METIS )
    find_package ( Metis QUIET )
    
    if ( METIS_FOUND )
        include_directories( ${METIS_INCLUDE_DIRS} ) 
        link_directories   ( ${METIS_LIBRARY_DIR}  )
        list ( APPEND SERVICE_LIBS ${METIS_LIBRARIES} )
        set  ( WALBERLA_BUILD_WITH_METIS TRUE )
    else()
        set  ( WALBERLA_BUILD_WITH_METIS OFF CACHE BOOL "Build with metis graph partitioner" FORCE )
    endif()
else()
    set ( METIS_FOUND OFF CACHE BOOL "Metis found" FORCE )    
endif()

############################################################################################################################



############################################################################################################################
##
## FFTW3
##
############################################################################################################################

if( WALBERLA_BUILD_WITH_MPI )
   find_package( PFFT )
   find_package( FFTW3 )
   set( FFT_REQUIRED_LIBRARIES pfft fftw3_mpi fftw3 )
   if( PFFT_FOUND AND FFTW3_MPI_FOUND )   
      set( WALBERLA_BUILD_WITH_FFT TRUE CACHE INTERNAL "Build with FFT" )
      include_directories( SYSTEM ${PFFT_INCLUDE_DIR} ${FFTW3_MPI_INCLUDE_DIR} )
      list( APPEND SERVICE_LIBS ${PFFT_LIBRARIES} ${FFTW3_LIBRARIES} ${FFTW3_MPI_LIBRARIES} )
   endif()
else()
   find_package( FFTW3 )
   set( FFT_REQUIRED_LIBRARIES fftw3 )
   if ( FFTW3_FOUND )
      set( WALBERLA_BUILD_WITH_FFT TRUE CACHE INTERNAL "Build with FFT" )
      include_directories( SYSTEM ${FFTW3_INCLUDE_DIR} )
      list( APPEND SERVICE_LIBS ${FFTW3_LIBRARIES} )
   endif()
endif()



############################################################################################################################
##
## DebugOptimized Build Configuration for fast execution of tests with enabled asserts
##
############################################################################################################################

set( CMAKE_C_FLAGS_DEBUGOPTIMIZED             ${CMAKE_C_FLAGS_DEBUG}             )
set( CMAKE_CXX_FLAGS_DEBUGOPTIMIZED           ${CMAKE_CXX_FLAGS_DEBUG}           )
set( CMAKE_EXE_LINKER_FLAGS_DEBUGOPTIMIZED    ${CMAKE_EXE_LINKER_FLAGS_DEBUG}    )
set( CMAKE_SHARED_LINKER_FLAGS_DEBUGOPTIMIZED ${CMAKE_SHARED_LINKER_FLAGS_DEBUG} )
set( CMAKE_MODULE_LINKER_FLAGS_DEBUGOPTIMIZED ${CMAKE_MODULE_LINKER_FLAGS_DEBUG} )

set_property(GLOBAL PROPERTY DEBUG_CONFIGURATIONS Debug DebugOptimized)

if ( WALBERLA_CXX_COMPILER_IS_MSVC )
    string(REPLACE "/Od" "/O2"   CMAKE_C_FLAGS_DEBUGOPTIMIZED   ${CMAKE_C_FLAGS_DEBUGOPTIMIZED})
    string(REPLACE "/Ob0" "/Ob2" CMAKE_C_FLAGS_DEBUGOPTIMIZED   ${CMAKE_C_FLAGS_DEBUGOPTIMIZED})
    string(REPLACE "/RTC1" ""    CMAKE_C_FLAGS_DEBUGOPTIMIZED   ${CMAKE_C_FLAGS_DEBUGOPTIMIZED})
    string(REPLACE "/Od" "/O2"   CMAKE_CXX_FLAGS_DEBUGOPTIMIZED ${CMAKE_CXX_FLAGS_DEBUGOPTIMIZED})
    string(REPLACE "/Ob0" "/Ob2" CMAKE_CXX_FLAGS_DEBUGOPTIMIZED ${CMAKE_CXX_FLAGS_DEBUGOPTIMIZED})
    string(REPLACE "/RTC1" ""    CMAKE_CXX_FLAGS_DEBUGOPTIMIZED ${CMAKE_CXX_FLAGS_DEBUGOPTIMIZED})
elseif( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_INTEL OR WALBERLA_CXX_COMPILER_IS_CLANG )
   set( CMAKE_C_FLAGS_DEBUGOPTIMIZED   "${CMAKE_C_FLAGS_DEBUGOPTIMIZED} -O3" ) 
   set( CMAKE_CXX_FLAGS_DEBUGOPTIMIZED "${CMAKE_CXX_FLAGS_DEBUGOPTIMIZED} -O3" ) 
endif()

set(CMAKE_C_FLAGS_DEBUGOPTIMIZED ${CMAKE_C_FLAGS_DEBUGOPTIMIZED} CACHE STRING 
    "Flags used by the compiler during DebugOptimized builds")
set(CMAKE_CXX_FLAGS_DEBUGOPTIMIZED ${CMAKE_CXX_FLAGS_DEBUGOPTIMIZED}  CACHE STRING
    "Flags used by the compiler during DebugOptimized builds")
set(CMAKE_EXE_LINKER_FLAGS_DEBUGOPTIMIZED ${CMAKE_EXE_LINKER_FLAGS_DEBUGOPTIMIZED} CACHE STRING
    "Flags used by the linker for executables during DebugOptimized builds")
set(CMAKE_SHARED_LINKER_FLAGS_DEBUGOPTIMIZED ${CMAKE_SHARED_LINKER_FLAGS_DEBUGOPTIMIZED} CACHE STRING
    "Flags used by the linker for shared libraries during DebugOptimized builds")
set(CMAKE_MODULE_LINKER_FLAGS_DEBUGOPTIMIZED ${CMAKE_MODULE_LINKER_FLAGS_DEBUGOPTIMIZED} CACHE STRING
    "Flags used by the linker for loadable modules during DebugOptimized builds")

mark_as_advanced(
    CMAKE_C_FLAGS_DEBUGOPTIMIZED
    CMAKE_CXX_FLAGS_DEBUGOPTIMIZED
    CMAKE_EXE_LINKER_FLAGS_DEBUGOPTIMIZED
    CMAKE_SHARED_LINKER_FLAGS_DEBUGOPTIMIZED
    CMAKE_MODULE_LINKER_FLAGS_DEBUGOPTIMIZED
)

# This variable is only set for multi-config IDE generators like VC
if( CMAKE_CONFIGURATION_TYPES )
    list( APPEND CMAKE_CONFIGURATION_TYPES DebugOptimized )
    list( REMOVE_DUPLICATES CMAKE_CONFIGURATION_TYPES )
    set ( CMAKE_CONFIGURATION_TYPES "${CMAKE_CONFIGURATION_TYPES}"
          CACHE STRING "Semicolon separated list of supported types
                      [Debug|Release|MinSizeRel|RelWithDebInfo|ReleaseNoOutfiles|DebugOptimized]" FORCE )
endif()
############################################################################################################################




   
############################################################################################################################
##
## OpenMP
##
############################################################################################################################

option ( WALBERLA_THREAD_SAFE_LOGGING "Enables/Disables thread-safe logging" ON )

if ( WALBERLA_BUILD_WITH_OPENMP )
    if ( WALBERLA_CXX_COMPILER_IS_INTEL )
       add_flag ( CMAKE_C_FLAGS   "-openmp" )
       add_flag ( CMAKE_CXX_FLAGS "-openmp" )
    elseif ( CMAKE_COMPILER_IS_GNUCXX )
      add_flag ( CMAKE_C_FLAGS   "-fopenmp" )
      add_flag ( CMAKE_CXX_FLAGS "-fopenmp" )
    elseif ( WALBERLA_CXX_COMPILER_IS_CLANG )
       add_flag ( CMAKE_C_FLAGS   "-fopenmp" )
       add_flag ( CMAKE_CXX_FLAGS "-fopenmp" )
    elseif ( WALBERLA_CXX_COMPILER_IS_MSVC )
      add_flag ( CMAKE_C_FLAGS   "/openmp" )
      add_flag ( CMAKE_CXX_FLAGS "/openmp" )
    elseif ( WALBERLA_CXX_COMPILER_IS_IBM )
      add_flag ( CMAKE_C_FLAGS   "-qsmp=omp" )
      add_flag ( CMAKE_CXX_FLAGS "-qsmp=omp" )
      # There has been an internal compiler error with the IBM compiler, so WALBERLA_THREAD_SAFE_LOGGING is disabled by default for this compiler
      set ( WALBERLA_THREAD_SAFE_LOGGING OFF CACHE BOOL "Enables/Disables thread-safe logging" FORCE )
    elseif ( WALBERLA_CXX_COMPILER_IS_NEC )
      add_flag ( CMAKE_C_FLAGS   "-Popenmp" )
      add_flag ( CMAKE_CXX_FLAGS "-Popenmp" )
    endif()
else()
    if ( WALBERLA_CXX_COMPILER_IS_CRAY )
      add_flag ( CMAKE_C_FLAGS   "-h noomp" )
      add_flag ( CMAKE_CXX_FLAGS "-h noomp" )
    endif()
endif()
############################################################################################################################



############################################################################################################################
##
##  Testing Coverage 
##
############################################################################################################################
if (WALBERLA_BUILD_WITH_GCOV AND CMAKE_COMPILER_IS_GNUCXX  )
    add_flag ( CMAKE_CXX_FLAGS_DEBUG "-fprofile-arcs -ftest-coverage" )
    add_flag ( LD_FLAGS              "-fprofile-arcs -ftest-coverage" )
endif()
############################################################################################################################



############################################################################################################################
##
##  Profiling with gprof
##
############################################################################################################################

if ( WALBERLA_BUILD_WITH_GPROF )
    if ( WALBERLA_CXX_COMPILER_IS_INTEL )
        add_flag ( CMAKE_CXX_FLAGS        "-pg" ) 
        add_flag ( CMAKE_EXE_LINKER_FLAGS "-pg" )
    elseif ( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_CLANG )
        add_flag ( CMAKE_CXX_FLAGS        "-pg" )
    endif()
endif()
############################################################################################################################


############################################################################################################################
##
##  Likwid Marker API
##
############################################################################################################################


if ( WALBERLA_BUILD_WITH_LIKWID_MARKERS )
    find_library( LIKWID_LIB likwid  HINTS $ENV{LIKWID_ROOT} )
    
    if ( LIKWID_LIB )
        set( LIKWID_FOUND 1)
        list ( APPEND SERVICE_LIBS ${LIKWID_LIB} )
        add_definitions ( "-DLIKWID_PERFMON" )
    else()
        message(WARNING "likwid marker library not found. Set environment variable LIKWID_ROOT")
        set ( WALBERLA_BUILD_WITH_LIKWID_MARKERS OFF CACHE BOOL "Compile in markers for likwid-perfctr" FORCE )
    endif()
endif()



############################################################################################################################
##
##  Link time optimizations
##
############################################################################################################################
if ( WALBERLA_BUILD_WITH_LTO  )
   
   if( WALBERLA_CXX_COMPILER_IS_INTEL )
      add_flag( CMAKE_CXX_FLAGS_RELEASE "-ip -ipo3" )
      add_flag( CMAKE_C_FLAGS_RELEASE   "-ip -ipo3" )
   endif()

   if ( CMAKE_COMPILER_IS_GNUCXX )
      add_flag ( CMAKE_C_FLAGS_RELEASE     "-flto=3" )
      add_flag ( CMAKE_CXX_FLAGS_RELEASE   "-flto=3" )
      add_flag ( CMAKE_EXE_LINKER_FLAGS    "-fuse-linker-plugin" )
   endif ( )
   
   if( WALBERLA_CXX_COMPILER_IS_MSVC )
      add_flag ( CMAKE_CXX_FLAGS_RELEASE           "/GL"   )
      add_flag ( CMAKE_EXE_LINKER_FLAGS_RELEASE    "/LTCG" )
      add_flag ( CMAKE_SHARED_LINKER_FLAGS_RELEASE "/LTCG" )
      add_flag ( CMAKE_MODULE_LINKER_FLAGS_RELEASE "/LTCG" )
   endif ( )
   
   if( WALBERLA_CXX_COMPILER_IS_IBM )
      add_flag ( CMAKE_C_FLAGS_RELEASE     "-qipa" )
      add_flag ( CMAKE_CXX_FLAGS_RELEASE   "-qipa" )
      add_flag ( CMAKE_EXE_LINKER_FLAGS    "-qipa" )
   endif( )   
   
endif ( )
############################################################################################################################

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############################################################################################################################
##
##  Sanitizer
##
############################################################################################################################
if ( WALBERLA_SANITIZE_ADDRESS )
    if ( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_CLANG )
        add_flag( CMAKE_CXX_FLAGS "-fsanitize=address")
    endif()
endif()
1095

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if ( WALBERLA_SANITIZE_UNDEFINED )
    if ( WALBERLA_CXX_COMPILER_IS_GNU OR WALBERLA_CXX_COMPILER_IS_CLANG )
        add_flag( CMAKE_CXX_FLAGS "-fsanitize=undefined")
    endif()
endif()
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############################################################################################################################
# Documentation Generation
#
# Build documentation using Doxygen (www.doxygen.org)
############################################################################################################################
find_package ( Doxygen  )
find_package ( HTMLHelp )

if ( HTML_HELP_COMPILER EQUAL "" )
   set ( HTML_HELP_FOUND "NO" )
else ( )
   set ( HTML_HELP_FOUND "YES" )
endif ( )
 
if ( DOXYGEN_FOUND )
   set ( DOXYGEN_HTML_HEADER ${walberla_SOURCE_DIR}/doc/header.html )
   set ( DOXYGEN_HTML_FOOTER ${walberla_SOURCE_DIR}/doc/footer.html )
   set ( DOXYGEN_HTML_OUTPUT "html" )
   
   configure_file ( ${walberla_SOURCE_DIR}/doc/doxygen.in ${walberla_BINARY_DIR}/doc/doxygen.cfg @ONLY )

   add_custom_target ( doc   ${DOXYGEN_EXECUTABLE} ${walberla_BINARY_DIR}/doc/doxygen.cfg
                       COMMENT "Generating API documentation with Doxygen" VERBATIM )
   
endif ( )
############################################################################################################################





############################################################################################################################
#
# Fix compiler bugs
#
############################################################################################################################

# The NEC SX has a few issues in its standard library headers
if( WALBERLA_CXX_COMPILER_IS_NEC )
   file( WRITE ${walberla_BINARY_DIR}/CMakeFiles/src/math.h         "#include_next <math.h>\n#undef fpclassify\n#undef signbit\n#undef isfinite\n#undef isinf\n#undef isnan\n#undef isnormal\n#undef isgreater\n#undef isgreaterequal\n#undef isless\n#undef islessequal\n#undef islessgreater\n#undef isunordered\n")
   file( WRITE ${walberla_BINARY_DIR}/CMakeFiles/src/sys/types.h    "#define uint_t SX_UINT_T\n#include \"/SX/usr/include/sys/types.h\"   \n#undef uint_t\n")
   file( WRITE ${walberla_BINARY_DIR}/CMakeFiles/src/sys/acl.h      "#define uint_t SX_UINT_T\n#include \"/SX/usr/include/sys/acl.h\"     \n#undef uint_t\n")
   file( WRITE ${walberla_BINARY_DIR}/CMakeFiles/src/sys/if_ehcpl.h "#define uint_t SX_UINT_T\n#include \"/SX/usr/include/sys/if_ehcpl.h\"\n#undef uint_t\n")
   file( WRITE ${walberla_BINARY_DIR}/CMakeFiles/src/sys/ptms.h     "#define uint_t SX_UINT_T\n#include \"/SX/usr/include/sys/ptms.h\"    \n#undef uint_t\n")
   file( WRITE ${walberla_BINARY_DIR}/CMakeFiles/src/sys/stream.h   "#define uint_t SX_UINT_T\n#include \"/SX/usr/include/sys/stream.h\"  \n#undef uint_t\n")
   file( WRITE ${walberla_BINARY_DIR}/CMakeFiles/src/sys/strsubr.h  "#define uint_t SX_UINT_T\n#include \"/SX/usr/include/sys/strsubr.h\" \n#undef uint_t\n")
   configure_file ( ${walberla_BINARY_DIR}/CMakeFiles/src/math.h         ${walberla_BINARY_DIR}/src/math.h COPYONLY )
   configure_file ( ${walberla_BINARY_DIR}/CMakeFiles/src/sys/types.h    ${walberla_BINARY_DIR}/src/sys/types.h    COPYONLY )
   configure_file ( ${walberla_BINARY_DIR}/CMakeFiles/src/sys/acl.h      ${walberla_BINARY_DIR}/src/sys/acl.h      COPYONLY )
   configure_file ( ${walberla_BINARY_DIR}/CMakeFiles/src/sys/if_ehcpl.h ${walberla_BINARY_DIR}/src/sys/if_ehcpl.h COPYONLY )
   configure_file ( ${walberla_BINARY_DIR}/CMakeFiles/src/sys/ptms.h     ${walberla_BINARY_DIR}/src/sys/ptms.h     COPYONLY )
   configure_file ( ${walberla_BINARY_DIR}/CMakeFiles/src/sys/stream.h   ${walberla_BINARY_DIR}/src/sys/stream.h   COPYONLY )
   configure_file ( ${walberla_BINARY_DIR}/CMakeFiles/src/sys/strsubr.h  ${walberla_BINARY_DIR}/src/sys/strsubr.h  COPYONLY )
endif()



############################################################################################################################
#
# Subdirectories
#
############################################################################################################################

# Add binary dir for generated headers
include_directories ( ${CMAKE_CURRENT_BINARY_DIR}/src )
# All include paths are specified relative to src/ directory               
include_directories ( ${CMAKE_CURRENT_SOURCE_DIR}/src )


# Generate file with compile options, and add install rule for it
configure_file ( src/waLBerlaDefinitions.in.h 
                 src/waLBerlaDefinitions.h    )
                 
install( FILES ${walberla_BINARY_DIR}/src/waLBerlaDefinitions.h DESTINATION walberla/ )

# sources
add_subdirectory ( src )

# test
if ( WALBERLA_BUILD_TESTS )
    add_subdirectory ( tests )
else()
    add_subdirectory( tests EXCLUDE_FROM_ALL )
endif()


add_subdirectory ( apps )

waLBerla_export()

############################################################################################################################